Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pmob_0807 | Pmob_0808 | Pmob_0807 | Pmob_0808 | PFAM: protein of unknown function DUF28; KEGG: tpt:Tpet_0454 protein of unknown function DUF28. | Hypothetical protein. | 0.568 |
Pmob_0807 | Pmob_0809 | Pmob_0807 | Pmob_0809 | PFAM: protein of unknown function DUF28; KEGG: tpt:Tpet_0454 protein of unknown function DUF28. | PFAM: MCP methyltransferase CheR-type; KEGG: tma:TM0464 putative chemotaxis protein methyltransferase. | 0.597 |
Pmob_0808 | Pmob_0807 | Pmob_0808 | Pmob_0807 | Hypothetical protein. | PFAM: protein of unknown function DUF28; KEGG: tpt:Tpet_0454 protein of unknown function DUF28. | 0.568 |
Pmob_0808 | Pmob_0809 | Pmob_0808 | Pmob_0809 | Hypothetical protein. | PFAM: MCP methyltransferase CheR-type; KEGG: tma:TM0464 putative chemotaxis protein methyltransferase. | 0.732 |
Pmob_0808 | mtnA | Pmob_0808 | Pmob_0810 | Hypothetical protein. | Translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.409 |
Pmob_0809 | Pmob_0807 | Pmob_0809 | Pmob_0807 | PFAM: MCP methyltransferase CheR-type; KEGG: tma:TM0464 putative chemotaxis protein methyltransferase. | PFAM: protein of unknown function DUF28; KEGG: tpt:Tpet_0454 protein of unknown function DUF28. | 0.597 |
Pmob_0809 | Pmob_0808 | Pmob_0809 | Pmob_0808 | PFAM: MCP methyltransferase CheR-type; KEGG: tma:TM0464 putative chemotaxis protein methyltransferase. | Hypothetical protein. | 0.732 |
Pmob_0809 | mtnA | Pmob_0809 | Pmob_0810 | PFAM: MCP methyltransferase CheR-type; KEGG: tma:TM0464 putative chemotaxis protein methyltransferase. | Translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | 0.429 |
mtnA | Pmob_0808 | Pmob_0810 | Pmob_0808 | Translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | Hypothetical protein. | 0.409 |
mtnA | Pmob_0809 | Pmob_0810 | Pmob_0809 | Translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). | PFAM: MCP methyltransferase CheR-type; KEGG: tma:TM0464 putative chemotaxis protein methyltransferase. | 0.429 |