STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0819PFAM: protein of unknown function DUF156; KEGG: csc:Csac_1728 protein of unknown function DUF156. (89 aa)    
Predicted Functional Partners:
Pmob_0820
KEGG: tme:Tmel_0224 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; Belongs to the peptidase S41A family.
     
 0.672
Pmob_0823
KEGG: tme:Tmel_0221 exporter of the RND superfamily-like protein.
       0.663
Pmob_0821
Hypothetical protein.
       0.656
Pmob_0822
Hypothetical protein.
       0.655
ftsH2
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In the central section; belongs to the AAA ATPase family.
       0.651
Pmob_0815
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: tpt:Tpet_0567 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.573
Pmob_0957
PFAM: putative esterase; KEGG: msi:Msm_0149 predicted acetylesterase.
  
  
 0.482
Pmob_1595
Hypothetical protein; KEGG: lpl:lp_2660 acetylesterase.
  
  
 0.482
Pmob_1850
PFAM: putative esterase; KEGG: rru:Rru_A0297 putative esterase.
  
  
 0.482
Pmob_0114
CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: tpt:Tpet_0251 CheC, inhibitor of MCP methylation.
    
   0.445
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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