STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0870PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: tte:TTE0012 NADH:flavin oxidoreductases, Old Yellow Enzyme family. (340 aa)    
Predicted Functional Partners:
Pmob_0130
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: amt:Amet_3749 electron transfer flavoprotein, alpha/beta-subunit-like protein.
  
 
 0.727
Pmob_0131
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: amt:Amet_3748 electron transfer flavoprotein, alpha subunit-like protein.
   
 
 0.683
Pmob_0871
Hypothetical protein.
       0.528
Pmob_0885
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tma:TM1217 glutamate synthase (NADPH) small chain.
 
    0.484
Pmob_0504
PFAM: alpha/beta hydrolase fold; inner-membrane translocator; PGAP1 family protein; KEGG: fno:Fnod_0527 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.459
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.452
Pmob_1618
PFAM: RNA binding S1 domain protein; KEGG: tma:TM1445 30S ribosomal protein S1.
   
    0.429
Pmob_0869
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sde:Sde_0264 signal transduction histidine kinase-like.
  
    0.424
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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