STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0889PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: fno:Fnod_1740 respiratory-chain NADH dehydrogenase subunit 1. (300 aa)    
Predicted Functional Partners:
Pmob_0886
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: tme:Tmel_1221 NADH dehydrogenase (quinone); Belongs to the complex I 49 kDa subunit family.
 
 
 0.998
Pmob_0891
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: tme:Tmel_1216 NADH/ubiquinone/plastoquinone (complex I).
 
 0.998
Pmob_0887
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: fno:Fnod_1738 NADH dehydrogenase (ubiquinone) 30 kDa subunit.
 
 0.997
Pmob_0890
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: tme:Tmel_1217 NADH dehydrogenase (quinone).
 
 
 0.988
Pmob_0885
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tma:TM1217 glutamate synthase (NADPH) small chain.
 
 
 0.983
Pmob_0888
PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: fno:Fnod_1739 NADH ubiquinone oxidoreductase 20 kDa subunit.
 
 
   0.982
Pmob_0723
TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; KEGG: cbf:CLI_1849 [Fe] hydrogenase.
  
 0.967
Pmob_0893
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: tma:TM1209 putative multicomponent Na+:H+ antiporter subunit B.
 
   0.940
Pmob_0580
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: tpt:Tpet_1638 NADH/ubiquinone/plastoquinone (complex I).
 
 
 0.937
Pmob_0894
KEGG: fno:Fnod_1745 hypothetical protein.
 
 
   0.932
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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