Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_0905TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: tpt:Tpet_0931 cell envelope-related transcriptional attenuator. (388 aa)    
Predicted Functional Partners:
Pmob_0906
PFAM: protein of unknown function DUF214; KEGG: sfu:Sfum_3743 lipoprotein releasing system, transmembrane protein, LolC/E family.
  
    0.819
Pmob_0904
KEGG: tma:TM1647 hypothetical protein.
       0.788
Pmob_1683
PFAM: polysaccharide pyruvyl transferase; KEGG: fno:Fnod_0990 polysaccharide pyruvyl transferase.
 
   
 0.788
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
 
     0.777
Pmob_1624
PFAM: S-layer domain protein; KEGG: tme:Tmel_1771 S-layer domain protein.
 
   
 0.720
Pmob_0311
KEGG: tme:Tmel_0921 hypothetical protein.
 
     0.705
Pmob_0908
TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase; KEGG: tpt:Tpet_0685 glucose-1-phosphate adenylyltransferase, GlgD subunit.
       0.691
Pmob_0878
KEGG: tme:Tmel_1841 hypothetical protein.
 
     0.676
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
       0.664
Pmob_1662
PFAM: glycosyl transferase family 4; KEGG: fno:Fnod_0247 glycosyl transferase family 4.
 
  
 0.639
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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