STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0908TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase; KEGG: tpt:Tpet_0685 glucose-1-phosphate adenylyltransferase, GlgD subunit. (373 aa)    
Predicted Functional Partners:
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.996
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
  
 
0.979
carB
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: phosphoribosylglycinamide synthetase; argininosuccinate synthase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: tte:TTE0816 Carbamoylphosphate synthase large subunit (split gene in MJ); Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.975
Pmob_1871
KEGG: cth:Cthe_0357 alpha-glucan phosphorylases; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35.
  
 
 0.974
Pmob_0061
KEGG: tpt:Tpet_0959 pullulanase, type I; TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; pullanase-associated protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.963
Pmob_1761
PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: tme:Tmel_0757 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
  
 
 0.924
Pmob_1857
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cac:CAC2337 phosphomannomutase.
  
 
 0.924
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.905
Pmob_0953
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: cth:Cthe_1221 glycosyltransferase 36.
     
  0.900
Pmob_1867
Sucrose-phosphate synthase; PFAM: glycosyl transferase group 1; KEGG: fno:Fnod_0446 sucrose-phosphate synthase.
 
 
 0.836
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.