STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0930PFAM: glycosyl transferase family 2; KEGG: cps:CPS_5020 glycosyl transferase, group 2 family protein. (351 aa)    
Predicted Functional Partners:
Pmob_0929
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: tme:Tmel_1063 sugar transferase.
  
 0.931
Pmob_0932
PFAM: glycosyl transferase group 1; KEGG: mac:MA2178 LPS biosynthesis protein.
     
 0.723
Pmob_0931
Hypothetical protein; KEGG: bfr:BF3651 putative O-antigen polymerase.
       0.709
Pmob_0402
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tme:Tmel_0311 tetratricopeptide TPR_2 repeat protein.
  
 
 0.705
Pmob_1281
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: tme:Tmel_1063 sugar transferase.
  
 0.677
Pmob_0232
PFAM: polysaccharide deacetylase; KEGG: csc:Csac_0205 polysaccharide deacetylase.
  
  
 0.656
Pmob_0933
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: fno:Fnod_0568 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
     
 0.652
Pmob_1060
Hypothetical protein.
  
 
 0.639
Pmob_1230
Hypothetical protein.
  
 
 0.639
Pmob_0538
KEGG: mgm:Mmc1_2227 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
  
 0.634
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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