STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0933PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: fno:Fnod_0568 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (353 aa)    
Predicted Functional Partners:
Pmob_1288
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: fno:Fnod_0568 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 
0.900
Pmob_0961
TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: tpt:Tpet_0335 UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 0.876
Pmob_0932
PFAM: glycosyl transferase group 1; KEGG: mac:MA2178 LPS biosynthesis protein.
 
  
 0.783
Pmob_0931
Hypothetical protein; KEGG: bfr:BF3651 putative O-antigen polymerase.
       0.693
Pmob_0939
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tme:Tmel_1072 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.690
Pmob_0929
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: tme:Tmel_1063 sugar transferase.
  
  
 0.671
Pmob_0937
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bpu:BPUM_3223 aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.663
Pmob_0930
PFAM: glycosyl transferase family 2; KEGG: cps:CPS_5020 glycosyl transferase, group 2 family protein.
     
 0.652
Pmob_0934
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: amt:Amet_0194 regulatory protein, MarR.
       0.576
Pmob_0941
PFAM: polysaccharide biosynthesis protein; KEGG: tpt:Tpet_0306 polysaccharide biosynthesis protein.
 
  
 0.566
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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