STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0942PFAM: GCN5-related N-acetyltransferase; KEGG: bpu:BPUM_3683 GNAT family acetyltransferase. (191 aa)    
Predicted Functional Partners:
Pmob_0404
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cbf:CLI_1631 transcriptional regulator, LuxR family.
  
     0.515
Pmob_1611
LVIVD repeat protein; PFAM: Fibronectin type III domain protein; LVIVD repeat protein; KEGG: mma:MM_0391 hypothetical protein.
  
     0.515
Pmob_0943
KEGG: sha:SH0390 capsular polysaccharide synthesis enzyme CapC.
       0.512
Pmob_1087
Hypothetical protein; KEGG: rba:RB13291 general secretion pathway protein D (outD); Belongs to the bacterial secretin family.
  
     0.512
Pmob_0403
Hypothetical protein; KEGG: mhu:Mhun_1291 mucin 2, intestinal/tracheal.
  
     0.495
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.494
Pmob_1135
PFAM: glycoside hydrolase family 13 domain protein; KEGG: tma:TM1844 hypothetical protein.
 
    0.482
Pmob_1074
PFAM: protein of unknown function DUF214; KEGG: tpt:Tpet_0224 protein of unknown function DUF214.
  
    0.476
Pmob_0944
Capsular exopolysaccharide family; KEGG: tme:Tmel_0659 lipopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
       0.471
Pmob_0935
KEGG: mmw:Mmwyl1_0827 hypothetical protein.
 
   
 0.444
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.