Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_0944Capsular exopolysaccharide family; KEGG: tme:Tmel_0659 lipopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein. (720 aa)    
Predicted Functional Partners:
Pmob_1613
PFAM: polysaccharide export protein; KEGG: tme:Tmel_0660 polysaccharide export protein.
 
 
 0.990
Pmob_0943
KEGG: sha:SH0390 capsular polysaccharide synthesis enzyme CapC.
 
  
 0.970
Pmob_0929
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: tme:Tmel_1063 sugar transferase.
 
  
 0.969
Pmob_1281
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: tme:Tmel_1063 sugar transferase.
 
  
 0.969
Pmob_1280
Capsular polysaccharide biosynthesis protein-like protein; KEGG: fjo:Fjoh_4993 PHP C-terminal domain protein.
 
  
 0.892
Pmob_1801
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tma:TM1548 lipopolysaccharide biosynthesis protein.
 
  
 0.865
Pmob_0959
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: tme:Tmel_1405 hypothetical protein.
 
  
 0.800
Pmob_1283
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; Polysaccharide biosynthesis domain protein; KEGG: drm:Dred_3033 polysaccharide biosynthesis protein CapD.
  
  
 0.747
Pmob_0936
PFAM: transferase hexapeptide repeat containing protein; KEGG: btk:BT9727_3282 possible galactoside O-acetyltransferase.
 
  
 0.702
Pmob_1315
PFAM: Nucleotidyl transferase; KEGG: tma:TM1033 mannose-1-phosphate guanylyltransferase.
 
  
 0.701
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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