STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0955PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1942 sugar ABC transporter, permease protein. (291 aa)    
Predicted Functional Partners:
Pmob_0956
Monosaccharide-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lmo:lmo1732 similar to sugar ABC transporter, permease protein.
   0.963
Pmob_0954
PFAM: extracellular solute-binding protein family 1; KEGG: lin:lin1841 similar to sugar ABC transporter binding protein.
   0.930
Pmob_1264
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE1829 sugar permeases.
 
 0.890
Pmob_0525
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0812 multiple sugar transport system permease protein.
   0.882
Pmob_0142
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gtn:GTNG_0826 sugar transport system permease.
   0.880
Pmob_0287
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tme:Tmel_0751 binding-protein-dependent transport systems inner membrane component.
   0.871
Pmob_0719
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tme:Tmel_0751 binding-protein-dependent transport systems inner membrane component.
   0.870
Pmob_0826
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_1231 binding-protein-dependent transport systems inner membrane component.
   0.870
Pmob_1378
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fno:Fnod_0396 binding-protein-dependent transport systems inner membrane component.
 
   0.865
Pmob_1490
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE1936 sugar permeases.
   0.857
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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