STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0957PFAM: putative esterase; KEGG: msi:Msm_0149 predicted acetylesterase. (265 aa)    
Predicted Functional Partners:
Pmob_0714
PFAM: protein of unknown function DUF156; KEGG: tme:Tmel_0131 protein of unknown function DUF156.
  
  
 0.482
Pmob_0819
PFAM: protein of unknown function DUF156; KEGG: csc:Csac_1728 protein of unknown function DUF156.
  
  
 0.482
Pmob_0958
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: eba:ebA2303 flavoprotein WrbA.
  
    0.465
Pmob_0956
Monosaccharide-transporting ATPase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lmo:lmo1732 similar to sugar ABC transporter, permease protein.
       0.437
tpiA
Phosphoglycerate kinase., Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
   
 
 0.424
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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