Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_0971PFAM: alanine racemase domain protein; KEGG: tma:TM1597 hypothetical protein. (354 aa)    
Predicted Functional Partners:
Pmob_1169
KEGG: fno:Fnod_1643 hypothetical protein.
 
  
  0.973
Pmob_1170
PFAM: cobalamin B12-binding domain protein; D-Lysine 56-aminomutase alpha subunit; KEGG: fno:Fnod_1642 cobalamin B12-binding domain protein.
 
  
  0.971
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
     
  0.800
Pmob_1167
KEGG: fno:Fnod_1645 hypothetical protein.
 
     0.750
Pmob_1168
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: fno:Fnod_1644 pyridoxal-5'-phosphate-dependent protein beta subunit.
 
     0.734
Pmob_1166
PFAM: dihydrodipicolinate reductase; KEGG: fno:Fnod_1646 dihydrodipicolinate reductase.
 
   
 0.721
Pmob_1650
PFAM: GCN5-related N-acetyltransferase; KEGG: amt:Amet_3702 GCN5-related N-acetyltransferase.
 
     0.685
Pmob_1816
KEGG: fno:Fnod_1665 methylaspartate mutase.
 
     0.679
Pmob_0970
Hypothetical protein.
       0.588
Pmob_0969
PFAM: Fe-S cluster domain protein; KEGG: tpt:Tpet_0675 Fe-S cluster domain protein.
       0.558
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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