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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_1281TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: tme:Tmel_1063 sugar transferase. (426 aa)    
Predicted Functional Partners:
Pmob_0944
Capsular exopolysaccharide family; KEGG: tme:Tmel_0659 lipopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein.
 
  
 0.960
Pmob_1280
Capsular polysaccharide biosynthesis protein-like protein; KEGG: fjo:Fjoh_4993 PHP C-terminal domain protein.
 
  
 0.793
Pmob_1613
PFAM: polysaccharide export protein; KEGG: tme:Tmel_0660 polysaccharide export protein.
 
  
 0.694
Pmob_0930
PFAM: glycosyl transferase family 2; KEGG: cps:CPS_5020 glycosyl transferase, group 2 family protein.
  
 0.677
Pmob_0943
KEGG: sha:SH0390 capsular polysaccharide synthesis enzyme CapC.
 
  
 0.639
Pmob_1315
PFAM: Nucleotidyl transferase; KEGG: tma:TM1033 mannose-1-phosphate guanylyltransferase.
 
  
 0.615
Pmob_1801
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tma:TM1548 lipopolysaccharide biosynthesis protein.
  
 0.598
Pmob_1709
KEGG: tpt:Tpet_0109 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
    
 0.565
Pmob_0941
PFAM: polysaccharide biosynthesis protein; KEGG: tpt:Tpet_0306 polysaccharide biosynthesis protein.
 
  
 0.554
Pmob_1301
PFAM: polysaccharide biosynthesis protein; KEGG: tpt:Tpet_0306 polysaccharide biosynthesis protein.
 
  
 0.549
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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