Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_1306PFAM: glycosyl transferase group 1; KEGG: tma:TM0619 hypothetical protein. (403 aa)    
Predicted Functional Partners:
Pmob_1307
PFAM: polysaccharide biosynthesis protein; KEGG: tpt:Tpet_0306 polysaccharide biosynthesis protein.
 
  
 0.915
Pmob_1308
PFAM: protein of unknown function UPF0150; KEGG: mem:Memar_1096 protein of unknown function UPF0150.
       0.773
Pmob_1812
PFAM: glycosyl transferase family 2; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tpt:Tpet_0171 glycosyl transferase, family 2.
 
 
 0.736
Pmob_1074
PFAM: protein of unknown function DUF214; KEGG: tpt:Tpet_0224 protein of unknown function DUF214.
  
    0.638
Pmob_1301
PFAM: polysaccharide biosynthesis protein; KEGG: tpt:Tpet_0306 polysaccharide biosynthesis protein.
 
  
 0.633
Pmob_0941
PFAM: polysaccharide biosynthesis protein; KEGG: tpt:Tpet_0306 polysaccharide biosynthesis protein.
 
  
 0.630
Pmob_1800
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: fno:Fnod_1450 glucose-1-phosphate thymidyltransferase.
 
  
 0.552
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.533
Pmob_0126
PFAM: glycosyl transferase group 1; KEGG: tpt:Tpet_0309 hypothetical protein.
  
     0.517
Pmob_1322
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tma:TM0509 UDP-glucose 4-epimerase, putative.
 
   
 0.505
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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