STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_1335PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oih:OB1022 ABC transporter ATP-binding protein. (316 aa)    
Predicted Functional Partners:
Pmob_1336
PFAM: ABC-2 type transporter; KEGG: oih:OB1023 hypothetical protein.
 
     0.945
Pmob_0594
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fno:Fnod_0090 ABC transporter related.
    
0.919
Pmob_0291
PFAM: ABC-2 type transporter; KEGG: tte:TTE1177 ABC-type multidrug transport system, permease component.
 
   
 0.659
Pmob_0213
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mba:Mbar_A0062 ABC transporter, ATP-binding protein.
  
     0.657
Pmob_1185
KEGG: tme:Tmel_0456 hypothetical protein.
  
 
 0.613
Pmob_1325
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: tma:TM0530 putative oligopeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
     
0.592
Pmob_1579
KEGG: tme:Tmel_1732 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.570
Pmob_1073
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0705 ABC transporter, ATP-binding protein.
  
0.534
Pmob_1504
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1763 ABC transporter related.
 
   
0.515
Pmob_0478
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: llm:llmg_1460 putative di/TRI-peptide transport ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
    
0.498
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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