STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_1346Hypothetical protein; KEGG: hwa:HQ2035A mandelate racemase/muconate lactonizing enzyme family protein. (313 aa)    
Predicted Functional Partners:
Pmob_1353
PFAM: PhoU family protein; KEGG: tpt:Tpet_1029 phosphate uptake regulator, PhoU.
 
     0.835
Pmob_1352
PFAM: permease YjgP/YjgQ family protein; KEGG: tme:Tmel_1543 permease YjgP/YjgQ family protein.
 
   
 0.823
Pmob_1351
TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: fno:Fnod_0147 phage SPO1 DNA polymerase-related protein.
 
     0.763
Pmob_1349
TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: lwe:lwe0979 methylated-DNA-protein-cysteine methyltransferase.
  
    0.746
Pmob_1347
KEGG: fno:Fnod_0931 hypothetical protein.
       0.741
Pmob_1348
KEGG: tme:Tmel_1883 nicotinic acid phosphoribosyltransferase-like protein; Belongs to the NAPRTase family.
       0.726
smc
SMC domain protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.726
Pmob_0824
KEGG: ppr:PBPRB1987 hypothetical protein.
  
     0.717
Pmob_0946
KEGG: tme:Tmel_0420 hypothetical protein.
  
     0.705
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
  
    0.678
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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