STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_1477TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: tpt:Tpet_1048 pyruvate ferredoxin/flavodoxin oxidoreductase. (180 aa)    
Predicted Functional Partners:
Pmob_1476
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: fno:Fnod_0112 thiamine pyrophosphate protein domain protein TPP-binding.
 0.999
Pmob_0203
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tme:Tmel_1767 thiamine pyrophosphate enzyme domain protein TPP-binding.
 
 0.996
Pmob_1475
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tme:Tmel_0104 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
 
 0.995
Pmob_1474
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tme:Tmel_0105 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
 0.992
Pmob_0459
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tpt:Tpet_1584 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit.
 
 0.975
Pmob_1668
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tma:TM0878 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
 
 0.966
Pmob_0458
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tpt:Tpet_1585 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 0.955
Pmob_0202
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: tpt:Tpet_0514 pyruvate ferredoxin/flavodoxin oxidoreductase.
  
  
 
0.923
Pmob_1667
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tme:Tmel_1897 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
    
 0.907
Pmob_1706
PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: cac:CAC0972 isocitrate dehydrogenase.
     
 0.900
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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