STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_1503PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lsl:LSL_1407 cobalt transport ATP-binding protein. (250 aa)    
Predicted Functional Partners:
Pmob_0455
PFAM: cobalt transport protein; KEGG: ssa:SSA_2365 cobalt transport protein CbiQ, putative.
 0.999
Pmob_1504
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: csc:Csac_1763 ABC transporter related.
 
 
 
0.993
Pmob_0813
PFAM: protein of unknown function DUF214; KEGG: tpt:Tpet_0569 protein of unknown function DUF214.
 
 
    0.902
Pmob_0118
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: fno:Fnod_0963 ABC transporter related.
 
    
0.901
Pmob_0543
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0848 ABC-type multidrug transport system, ATPase component.
 
   
0.878
Pmob_0688
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC1558 ABC-type transport system,membrane ATPase component.
 
    
0.851
Pmob_0491
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: pab:PAB0630 oligopeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.841
Pmob_1046
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC1558 ABC-type transport system,membrane ATPase component.
 
    
0.834
Pmob_0235
KEGG: tpt:Tpet_0850 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.832
Pmob_1655
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smr:Smar_1543 polar amino acid ABC transporter, inner membrane subunit.
 
 
    0.830
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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