STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_1607PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: tpt:Tpet_0550 methyl-accepting chemotaxis sensory transducer. (668 aa)    
Predicted Functional Partners:
Pmob_1390
CheA signal transduction histidine kinase; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: tpt:Tpet_0228 CheA signal transduction histidine kinase.
 
 
 0.935
Pmob_1391
PFAM: CheW domain protein; KEGG: tpt:Tpet_0229 putative CheW protein.
 
 
 0.911
Pmob_0388
PFAM: CheW domain protein; KEGG: tme:Tmel_0275 putative CheW protein.
 
 
 0.910
Pmob_0809
PFAM: MCP methyltransferase CheR-type; KEGG: tma:TM0464 putative chemotaxis protein methyltransferase.
 
 0.863
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.853
Pmob_0538
KEGG: mgm:Mmc1_2227 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
 
 0.790
Pmob_1402
PFAM: CheC domain protein; KEGG: tme:Tmel_1433 CheC, inhibitor of MCP methylation.
 
 
 0.582
Pmob_0114
CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: tpt:Tpet_0251 CheC, inhibitor of MCP methylation.
 
 
 0.572
Pmob_1608
PFAM: L-fucose isomerase _1 domain protein; L-fucose isomerase _2 domain protein; L-fucose isomerase-like-like; KEGG: tpt:Tpet_0610 L-fucose isomerase, N-terminal_2 domain protein.
  
    0.571
Pmob_1609
Xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: tma:TM0284 sugar kinase, FGGY family.
   
   0.530
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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