STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_1737TIGRFAM: selenium metabolism protein SsnA; PFAM: amidohydrolase; KEGG: cbh:CLC_2780 amidohydrolase family protein. (443 aa)    
Predicted Functional Partners:
Pmob_1740
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: smr:Smar_0357 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 
  
 0.874
Pmob_1743
TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cdf:CD3179 putative dihydroorotate dehydrogenase, catalytic subunit.
 
  
 0.855
Pmob_1729
TIGRFAM: M20/DapE family protein YgeY; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cbf:CLI_2938 peptidase, M20/M25/M40 family.
 
  
 0.830
Pmob_1738
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: swo:Swol_1819 medium FAD-binding subunit of molybdenum enzyme.
 
  
 0.819
Pmob_1742
SMART: AAA ATPase; KEGG: cbf:CLI_2950 hypothetical protein.
 
     0.802
Pmob_1739
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: chy:CHY_0691 2Fe-2S iron-sulfur cluster binding domain.
  
  
 0.800
Pmob_1741
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mta:Moth_1225 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
  
  
 0.794
Pmob_1736
PFAM: amidohydrolase; KEGG: cbe:Cbei_2067 amidohydrolase.
 
    
0.792
ade
KEGG: amt:Amet_4567 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
     
 0.771
Pmob_1735
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: gme:Gmet_2135 ferredoxin:(2Fe-2S)-binding protein.
  
  
 0.738
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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