Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Pmob_1748PFAM: transport system permease protein; ABC-3 protein; KEGG: mac:MA4533 iron compounds ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (347 aa)    
Predicted Functional Partners:
Pmob_1749
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH653 iron ABC transporter ATP-binding protein.
 
 0.996
Pmob_0040
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fno:Fnod_1090 ABC transporter related.
 
 0.983
Pmob_1747
PFAM: periplasmic binding protein; KEGG: sth:STH651 iron ABC transporter substrate-binding protein.
 
 
 0.966
Pmob_0038
PFAM: periplasmic binding protein; KEGG: tme:Tmel_0038 periplasmic binding protein.
 
 
 0.904
Pmob_1746
Conserved hypothetical protein; Possibly involved in molybdenum cofactor biosynthesis; KEGG: gme:Gmet_2140 conserved hypothetical protein, possibly involved in molybdenum cofactor biosynthesis.
       0.685
Pmob_1750
KEGG: tme:Tmel_0548 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
       0.645
Pmob_1742
SMART: AAA ATPase; KEGG: cbf:CLI_2950 hypothetical protein.
 
     0.530
Pmob_1745
PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mja:MJ0326 hypothetical protein.
       0.493
Pmob_1739
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: chy:CHY_0691 2Fe-2S iron-sulfur cluster binding domain.
       0.458
Pmob_1738
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: swo:Swol_1819 medium FAD-binding subunit of molybdenum enzyme.
       0.456
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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