Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_1850PFAM: putative esterase; KEGG: rru:Rru_A0297 putative esterase. (276 aa)    
Predicted Functional Partners:
Pmob_1595
Hypothetical protein; KEGG: lpl:lp_2660 acetylesterase.
  
     0.772
Pmob_1851
KEGG: tte:TTE2425 hypothetical protein.
       0.727
Pmob_1852
PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: tme:Tmel_0187 ribosomal L11 methyltransferase.
       0.727
Pmob_1853
PFAM: protein of unknown function DUF501; KEGG: tme:Tmel_0186 protein of unknown function DUF501.
       0.727
miaB
RNA modification enzyme, MiaB family; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.658
Pmob_0471
PFAM: beta-lactamase; KEGG: sus:Acid_3631 uncharacterised conserved protein UCP016719.
    
 0.596
rpsB
PFAM: ribosomal protein S2; KEGG: tma:TM0762 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
       0.504
Pmob_0714
PFAM: protein of unknown function DUF156; KEGG: tme:Tmel_0131 protein of unknown function DUF156.
  
  
 0.450
Pmob_0819
PFAM: protein of unknown function DUF156; KEGG: csc:Csac_1728 protein of unknown function DUF156.
  
  
 0.450
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.431
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.