STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP61055.1Putative multiple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (430 aa)    
Predicted Functional Partners:
SEP61093.1
Putative multiple sugar transport system substrate-binding protein.
 
 0.999
SEP61078.1
Putative multiple sugar transport system ATP-binding protein.
 
 0.998
SEQ46550.1
D-xylose transport system substrate-binding protein.
 
 0.952
SEQ46516.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
 0.914
SEP83998.1
Ribose transport system ATP-binding protein.
 
 0.913
SEQ99704.1
Ribose transport system ATP-binding protein.
 
 0.913
SEP60963.1
Multiple sugar transport system permease protein.
     
  0.900
SEP61037.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
     0.885
SEP84018.1
Simple sugar transport system substrate-binding protein/ribose transport system substrate-binding protein.
 
 0.880
SEQ99738.1
Ribose transport system substrate-binding protein.
 
 
 0.863
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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