Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP63411.1 | SEP63427.1 | SAMN05216481_101517 | SAMN05216481_101518 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.789 |
SEP63411.1 | SEP63440.1 | SAMN05216481_101517 | SAMN05216481_101519 | Hypothetical protein. | Predicted O-methyltransferase YrrM. | 0.773 |
SEP63427.1 | SEP63411.1 | SAMN05216481_101518 | SAMN05216481_101517 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.789 |
SEP63427.1 | SEP63440.1 | SAMN05216481_101518 | SAMN05216481_101519 | N-acetylmuramoyl-L-alanine amidase. | Predicted O-methyltransferase YrrM. | 0.870 |
SEP63427.1 | SEP70613.1 | SAMN05216481_101518 | SAMN05216481_101837 | N-acetylmuramoyl-L-alanine amidase. | Calcineurin-like phosphoesterase. | 0.721 |
SEP63427.1 | SEP98667.1 | SAMN05216481_101518 | SAMN05216481_103153 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.935 |
SEP63427.1 | SEQ22556.1 | SAMN05216481_101518 | SAMN05216481_1058 | N-acetylmuramoyl-L-alanine amidase. | Transglycosylase SLT domain-containing protein. | 0.750 |
SEP63427.1 | SEQ50169.1 | SAMN05216481_101518 | SAMN05216481_10935 | N-acetylmuramoyl-L-alanine amidase. | Membrane associated serine protease, rhomboid family. | 0.935 |
SEP63427.1 | SEQ50790.1 | SAMN05216481_101518 | SAMN05216481_10969 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein-sorting protein. | 0.956 |
SEP63427.1 | SEQ53377.1 | SAMN05216481_101518 | SAMN05216481_109204 | N-acetylmuramoyl-L-alanine amidase. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.760 |
SEP63427.1 | SEQ71860.1 | SAMN05216481_101518 | SAMN05216481_113126 | N-acetylmuramoyl-L-alanine amidase. | SH3 domain-containing protein. | 0.581 |
SEP63427.1 | SEQ78712.1 | SAMN05216481_101518 | SAMN05216481_115103 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.596 |
SEP63440.1 | SEP63411.1 | SAMN05216481_101519 | SAMN05216481_101517 | Predicted O-methyltransferase YrrM. | Hypothetical protein. | 0.773 |
SEP63440.1 | SEP63427.1 | SAMN05216481_101519 | SAMN05216481_101518 | Predicted O-methyltransferase YrrM. | N-acetylmuramoyl-L-alanine amidase. | 0.870 |
SEP70613.1 | SEP63427.1 | SAMN05216481_101837 | SAMN05216481_101518 | Calcineurin-like phosphoesterase. | N-acetylmuramoyl-L-alanine amidase. | 0.721 |
SEP98667.1 | SEP63427.1 | SAMN05216481_103153 | SAMN05216481_101518 | Membrane associated serine protease, rhomboid family. | N-acetylmuramoyl-L-alanine amidase. | 0.935 |
SEP98667.1 | SEQ50169.1 | SAMN05216481_103153 | SAMN05216481_10935 | Membrane associated serine protease, rhomboid family. | Membrane associated serine protease, rhomboid family. | 0.652 |
SEQ22556.1 | SEP63427.1 | SAMN05216481_1058 | SAMN05216481_101518 | Transglycosylase SLT domain-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.750 |
SEQ50169.1 | SEP63427.1 | SAMN05216481_10935 | SAMN05216481_101518 | Membrane associated serine protease, rhomboid family. | N-acetylmuramoyl-L-alanine amidase. | 0.935 |
SEQ50169.1 | SEP98667.1 | SAMN05216481_10935 | SAMN05216481_103153 | Membrane associated serine protease, rhomboid family. | Membrane associated serine protease, rhomboid family. | 0.652 |
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