Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP55454.1 | SEP64504.1 | SAMN05216481_10110 | SAMN05216481_101570 | Sporulation and spore germination. | Hypothetical protein. | 0.472 |
SEP55454.1 | SEQ04043.1 | SAMN05216481_10110 | SAMN05216481_103405 | Sporulation and spore germination. | Tight adherence protein B. | 0.617 |
SEP55454.1 | SEQ66184.1 | SAMN05216481_10110 | SAMN05216481_11247 | Sporulation and spore germination. | Protein of unknown function. | 0.671 |
SEP55454.1 | SEQ78531.1 | SAMN05216481_10110 | SAMN05216481_11592 | Sporulation and spore germination. | Hypothetical protein. | 0.590 |
SEP64452.1 | SEP64504.1 | SAMN05216481_101568 | SAMN05216481_101570 | Heme oxygenase. | Hypothetical protein. | 0.737 |
SEP64452.1 | map | SAMN05216481_101568 | SAMN05216481_101569 | Heme oxygenase. | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.793 |
SEP64504.1 | SEP55454.1 | SAMN05216481_101570 | SAMN05216481_10110 | Hypothetical protein. | Sporulation and spore germination. | 0.472 |
SEP64504.1 | SEP64452.1 | SAMN05216481_101570 | SAMN05216481_101568 | Hypothetical protein. | Heme oxygenase. | 0.737 |
SEP64504.1 | SEP64513.1 | SAMN05216481_101570 | SAMN05216481_101571 | Hypothetical protein. | Hypothetical protein. | 0.675 |
SEP64504.1 | SEP83826.1 | SAMN05216481_101570 | SAMN05216481_102177 | Hypothetical protein. | DNA-binding transcriptional regulator, MerR family. | 0.480 |
SEP64504.1 | SEP99531.1 | SAMN05216481_101570 | SAMN05216481_103194 | Hypothetical protein. | Alanine racemase. | 0.488 |
SEP64504.1 | SEQ04043.1 | SAMN05216481_101570 | SAMN05216481_103405 | Hypothetical protein. | Tight adherence protein B. | 0.406 |
SEP64504.1 | SEQ66184.1 | SAMN05216481_101570 | SAMN05216481_11247 | Hypothetical protein. | Protein of unknown function. | 0.408 |
SEP64504.1 | SEQ78531.1 | SAMN05216481_101570 | SAMN05216481_11592 | Hypothetical protein. | Hypothetical protein. | 0.643 |
SEP64504.1 | map | SAMN05216481_101570 | SAMN05216481_101569 | Hypothetical protein. | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.810 |
SEP64513.1 | SEP64504.1 | SAMN05216481_101571 | SAMN05216481_101570 | Hypothetical protein. | Hypothetical protein. | 0.675 |
SEP83826.1 | SEP64504.1 | SAMN05216481_102177 | SAMN05216481_101570 | DNA-binding transcriptional regulator, MerR family. | Hypothetical protein. | 0.480 |
SEP99531.1 | SEP64504.1 | SAMN05216481_103194 | SAMN05216481_101570 | Alanine racemase. | Hypothetical protein. | 0.488 |
SEP99531.1 | SEQ04043.1 | SAMN05216481_103194 | SAMN05216481_103405 | Alanine racemase. | Tight adherence protein B. | 0.422 |
SEP99531.1 | SEQ66184.1 | SAMN05216481_103194 | SAMN05216481_11247 | Alanine racemase. | Protein of unknown function. | 0.530 |
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