STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP65343.1Arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein. (427 aa)    
Predicted Functional Partners:
SEP65364.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
  0.999
SEP65386.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
 
 0.999
SEQ25121.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.996
SEQ63690.1
N,N'-diacetylchitobiose transport system permease protein.
 
 0.986
SEQ46615.1
N-acetylglucosamine transport system permease protein.
 
 0.978
SEP90124.1
Raffinose/stachyose/melibiose transport system permease protein.
 0.971
SEP65319.1
Arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein.
 
  
0.962
SEP60963.1
Multiple sugar transport system permease protein.
 0.891
SEP71713.1
Multiple sugar transport system permease protein.
  0.887
SER02508.1
Cellobiose transport system permease protein.
 
  0.884
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.