STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP67950.1Serine/threonine protein kinase. (660 aa)    
Predicted Functional Partners:
SEP98468.1
Protein phosphatase.
 0.996
SEQ19710.1
FHA domain-containing protein.
 
 
 
 0.996
SEP57815.1
Serine/threonine protein phosphatase PrpC.
 
 0.990
SEP98441.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
 
 
 
 0.983
SEP98430.1
FHA domain-containing protein.
 
 
 
 0.980
SEQ45582.1
Protein of unknown function.
 
 
 
 0.977
SEP73436.1
ABC-type multidrug transport system, ATPase component.
  
 
 0.975
SEQ72069.1
Protein phosphatase 2C.
  
 0.975
SEQ13748.1
Protein of unknown function.
   
 
 0.972
SEP55564.1
FtsK/SpoIIIE family protein.
   
 
 0.970
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.