Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP70282.1 | SEP70296.1 | SAMN05216481_101822 | SAMN05216481_101823 | Hypothetical protein. | Protein of unknown function. | 0.513 |
SEP70296.1 | SEP70282.1 | SAMN05216481_101823 | SAMN05216481_101822 | Protein of unknown function. | Hypothetical protein. | 0.513 |
SEP70296.1 | SEP70324.1 | SAMN05216481_101823 | SAMN05216481_101824 | Protein of unknown function. | Streptogrisin B. | 0.589 |
SEP70296.1 | SEQ11463.1 | SAMN05216481_101823 | SAMN05216481_10436 | Protein of unknown function. | WD40-like Beta Propeller Repeat. | 0.819 |
SEP70296.1 | SEQ18950.1 | SAMN05216481_101823 | SAMN05216481_104372 | Protein of unknown function. | GMP synthase (glutamine-hydrolysing). | 0.638 |
SEP70296.1 | SEQ57285.1 | SAMN05216481_101823 | SAMN05216481_110106 | Protein of unknown function. | SurA N-terminal domain-containing protein. | 0.552 |
SEP70296.1 | SEQ82573.1 | SAMN05216481_101823 | SAMN05216481_11697 | Protein of unknown function. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.421 |
SEP70296.1 | SER00995.1 | SAMN05216481_101823 | SAMN05216481_1275 | Protein of unknown function. | Signal transduction histidine kinase. | 0.681 |
SEP70296.1 | guaA | SAMN05216481_101823 | SAMN05216481_1124 | Protein of unknown function. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.638 |
SEP70296.1 | mfd | SAMN05216481_101823 | SAMN05216481_11097 | Protein of unknown function. | Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.595 |
SEP70296.1 | secY | SAMN05216481_101823 | SAMN05216481_109162 | Protein of unknown function. | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.413 |
SEP70324.1 | SEP70296.1 | SAMN05216481_101824 | SAMN05216481_101823 | Streptogrisin B. | Protein of unknown function. | 0.589 |
SEP70324.1 | SER00995.1 | SAMN05216481_101824 | SAMN05216481_1275 | Streptogrisin B. | Signal transduction histidine kinase. | 0.710 |
SEQ11463.1 | SEP70296.1 | SAMN05216481_10436 | SAMN05216481_101823 | WD40-like Beta Propeller Repeat. | Protein of unknown function. | 0.819 |
SEQ11463.1 | SER00995.1 | SAMN05216481_10436 | SAMN05216481_1275 | WD40-like Beta Propeller Repeat. | Signal transduction histidine kinase. | 0.565 |
SEQ18950.1 | SEP70296.1 | SAMN05216481_104372 | SAMN05216481_101823 | GMP synthase (glutamine-hydrolysing). | Protein of unknown function. | 0.638 |
SEQ18950.1 | SER00995.1 | SAMN05216481_104372 | SAMN05216481_1275 | GMP synthase (glutamine-hydrolysing). | Signal transduction histidine kinase. | 0.856 |
SEQ18950.1 | guaA | SAMN05216481_104372 | SAMN05216481_1124 | GMP synthase (glutamine-hydrolysing). | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.793 |
SEQ18950.1 | secY | SAMN05216481_104372 | SAMN05216481_109162 | GMP synthase (glutamine-hydrolysing). | Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.430 |
SEQ57285.1 | SEP70296.1 | SAMN05216481_110106 | SAMN05216481_101823 | SurA N-terminal domain-containing protein. | Protein of unknown function. | 0.552 |
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