STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP82165.1Glycosyl transferase family 2. (375 aa)    
Predicted Functional Partners:
SEP82198.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
   
 0.995
SEP82278.1
D-sedoheptulose 7-phosphate isomerase.
 
 
 0.987
SEP82303.1
rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.983
SEP82208.1
ADP-heptose:LPS heptosyltransferase.
 
  
 0.980
SEP82324.1
ADP-heptose:LPS heptosyltransferase.
 
  
 0.977
SEP82236.1
Glycosyl transferases group 1.
 
 
 0.969
SEP82344.1
Glycosyltransferase, GT2 family.
 
     0.967
SEP82369.1
Glycosyltransferase, GT2 family.
 
     0.967
SEP82259.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
 0.964
SEP81369.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.957
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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