Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP64285.1 | SEP83364.1 | SAMN05216481_101560 | SAMN05216481_102156 | Tetratricopeptide repeat-containing protein. | Uncharacterized protein. | 0.868 |
SEP64285.1 | rpoA | SAMN05216481_101560 | SAMN05216481_109170 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.972 |
SEP64285.1 | rpoB | SAMN05216481_101560 | SAMN05216481_109119 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.958 |
SEP64285.1 | rpoZ | SAMN05216481_101560 | SAMN05216481_102528 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.960 |
SEP83364.1 | SEP64285.1 | SAMN05216481_102156 | SAMN05216481_101560 | Uncharacterized protein. | Tetratricopeptide repeat-containing protein. | 0.868 |
SEP83364.1 | SEP84959.1 | SAMN05216481_102156 | SAMN05216481_102231 | Uncharacterized protein. | Tetratricopeptide repeat-containing protein. | 0.868 |
SEP83364.1 | SEP96079.1 | SAMN05216481_102156 | SAMN05216481_10337 | Uncharacterized protein. | Tetratricopeptide repeat-containing protein. | 0.868 |
SEP83364.1 | SEQ23921.1 | SAMN05216481_102156 | SAMN05216481_10572 | Uncharacterized protein. | Hypothetical protein. | 0.868 |
SEP83364.1 | SEQ44828.1 | SAMN05216481_102156 | SAMN05216481_10882 | Uncharacterized protein. | Hypothetical protein. | 0.868 |
SEP83364.1 | SEQ63506.1 | SAMN05216481_102156 | SAMN05216481_111160 | Uncharacterized protein. | Hypothetical protein. | 0.868 |
SEP83364.1 | SEQ86584.1 | SAMN05216481_102156 | SAMN05216481_1184 | Uncharacterized protein. | Hypothetical protein. | 0.868 |
SEP83364.1 | rpoA | SAMN05216481_102156 | SAMN05216481_109170 | Uncharacterized protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.978 |
SEP83364.1 | rpoB | SAMN05216481_102156 | SAMN05216481_109119 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.973 |
SEP83364.1 | rpoZ | SAMN05216481_102156 | SAMN05216481_102528 | Uncharacterized protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.971 |
SEP84959.1 | SEP83364.1 | SAMN05216481_102231 | SAMN05216481_102156 | Tetratricopeptide repeat-containing protein. | Uncharacterized protein. | 0.868 |
SEP84959.1 | rpoA | SAMN05216481_102231 | SAMN05216481_109170 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.972 |
SEP84959.1 | rpoB | SAMN05216481_102231 | SAMN05216481_109119 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.958 |
SEP84959.1 | rpoZ | SAMN05216481_102231 | SAMN05216481_102528 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.960 |
SEP96079.1 | SEP83364.1 | SAMN05216481_10337 | SAMN05216481_102156 | Tetratricopeptide repeat-containing protein. | Uncharacterized protein. | 0.868 |
SEP96079.1 | rpoA | SAMN05216481_10337 | SAMN05216481_109170 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.972 |
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