STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP81634.1Hypothetical protein. (402 aa)    
Predicted Functional Partners:
SEQ35314.1
L-lactate dehydrogenase complex protein LldF.
    
   0.845
SEP81663.1
Hemerythrin HHE cation binding domain-containing protein.
 
     0.658
SEQ13561.1
STAS domain-containing protein.
  
    0.593
SEP88190.1
Protein of unknown function.
 
     0.577
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.577
SEP82021.1
Hemerythrin HHE cation binding domain-containing protein.
 
     0.576
SEP67854.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
  
 0.563
SEP81599.1
Glycine/D-amino acid oxidase.
 
     0.531
SEP67026.1
Cysteine desulfurase; Belongs to the sulfur carrier protein TusA family.
  
 
  0.529
SEQ43337.1
PAS fold-containing protein.
  
     0.507
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.