STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ13361.1Anti-sigma regulatory factor (Ser/Thr protein kinase). (138 aa)    
Predicted Functional Partners:
SEQ61276.1
Histidine kinase-like ATPase domain-containing protein.
  
   0.793
SEQ70314.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
   0.774
SEP62783.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
   0.758
SEP86736.1
Histidine kinase-like ATPase domain-containing protein.
  
     0.694
SEQ98741.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
   0.634
SEQ31703.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
   
   0.621
SEQ71186.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.616
SEP66080.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.605
SEQ02094.1
Anti-anti-sigma factor.
  
   0.601
SEQ28560.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   0.596
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.