STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ14473.1Protein of unknown function. (114 aa)    
Predicted Functional Partners:
SEQ14447.1
Protein of unknown function.
 
     0.950
SEQ13810.1
Spore photoproduct lyase family protein.
 
     0.608
SEP65655.1
Hypothetical protein.
       0.550
SEQ14399.1
Transglutaminase-like superfamily protein.
       0.494
SEQ14428.1
ABC-type multidrug transport system, ATPase and permease component.
       0.494
SEQ11019.1
Protein of unknown function.
  
     0.493
SEP81538.1
Endonuclease III.
 
   
 0.477
SEQ89563.1
Geranylgeranyl reductase family.
  
     0.418
SEP58170.1
NhaP-type Na+/H+ or K+/H+ antiporter.
  
     0.412
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.