STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ12175.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (208 aa)    
Predicted Functional Partners:
SER00995.1
Signal transduction histidine kinase.
  
 0.994
SEP73456.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  0.799
SEP89538.1
Histidine kinase.
 
 0.747
SEQ50993.1
Signal transduction histidine kinase.
 
 0.720
SEQ92256.1
Signal transduction histidine kinase.
  
  0.661
SEQ96549.1
Signal transduction histidine kinase.
  
  0.659
SEQ06375.1
Signal transduction histidine kinase.
  
  0.658
SEQ05608.1
Two-component system, NarL family, sensor histidine kinase DesK.
  
  0.655
SEQ40196.1
Signal transduction histidine kinase.
  
  0.653
SEQ60729.1
Signal transduction histidine kinase.
  
  0.645
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
Server load: low (14%) [HD]