STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ25747.1Glucokinase. (318 aa)    
Predicted Functional Partners:
SEQ25665.1
Fructose-bisphosphate aldolase, class II.
    
  0.966
SEQ25719.1
N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.927
SEP67588.1
Glucokinase.
  
  
 
0.914
SEQ44560.1
Glucokinase.
  
  
 
0.911
SEQ34654.1
Glucokinase.
  
  
 
0.910
SEQ97516.1
Glucokinase.
  
  
 
0.909
SEP61037.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
  
  0.905
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.899
SEP99508.1
Myo-inositol-1-phosphate synthase.
     
 0.898
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.893
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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