Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP84076.1 | SEP98729.1 | SAMN05216481_102189 | SAMN05216481_103157 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.455 |
SEP84076.1 | SEQ03102.1 | SAMN05216481_102189 | SAMN05216481_103358 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.563 |
SEP84076.1 | SEQ34544.1 | SAMN05216481_102189 | SAMN05216481_106144 | Helix-turn-helix domain-containing protein. | TIGR03083 family protein. | 0.495 |
SEP96677.1 | SEP98729.1 | SAMN05216481_10362 | SAMN05216481_103157 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.546 |
SEP96677.1 | SEQ34544.1 | SAMN05216481_10362 | SAMN05216481_106144 | Helix-turn-helix domain-containing protein. | TIGR03083 family protein. | 0.508 |
SEP98729.1 | SEP84076.1 | SAMN05216481_103157 | SAMN05216481_102189 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.455 |
SEP98729.1 | SEP96677.1 | SAMN05216481_103157 | SAMN05216481_10362 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.546 |
SEP98729.1 | SEQ34544.1 | SAMN05216481_103157 | SAMN05216481_106144 | Hypothetical protein. | TIGR03083 family protein. | 0.541 |
SEP98729.1 | SEQ90472.1 | SAMN05216481_103157 | SAMN05216481_11960 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.410 |
SEQ03102.1 | SEP84076.1 | SAMN05216481_103358 | SAMN05216481_102189 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.563 |
SEQ03102.1 | SEQ34544.1 | SAMN05216481_103358 | SAMN05216481_106144 | Hypothetical protein. | TIGR03083 family protein. | 0.497 |
SEQ03102.1 | SEQ90472.1 | SAMN05216481_103358 | SAMN05216481_11960 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.671 |
SEQ22855.1 | SEQ34544.1 | SAMN05216481_10523 | SAMN05216481_106144 | Helix-turn-helix. | TIGR03083 family protein. | 0.542 |
SEQ29062.1 | SEQ34544.1 | SAMN05216481_105297 | SAMN05216481_106144 | Helix-turn-helix domain-containing protein. | TIGR03083 family protein. | 0.496 |
SEQ34529.1 | SEQ34544.1 | SAMN05216481_106143 | SAMN05216481_106144 | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | TIGR03083 family protein. | 0.610 |
SEQ34544.1 | SEP84076.1 | SAMN05216481_106144 | SAMN05216481_102189 | TIGR03083 family protein. | Helix-turn-helix domain-containing protein. | 0.495 |
SEQ34544.1 | SEP96677.1 | SAMN05216481_106144 | SAMN05216481_10362 | TIGR03083 family protein. | Helix-turn-helix domain-containing protein. | 0.508 |
SEQ34544.1 | SEP98729.1 | SAMN05216481_106144 | SAMN05216481_103157 | TIGR03083 family protein. | Hypothetical protein. | 0.541 |
SEQ34544.1 | SEQ03102.1 | SAMN05216481_106144 | SAMN05216481_103358 | TIGR03083 family protein. | Hypothetical protein. | 0.497 |
SEQ34544.1 | SEQ22855.1 | SAMN05216481_106144 | SAMN05216481_10523 | TIGR03083 family protein. | Helix-turn-helix. | 0.542 |
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