STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ33432.1Predicted NAD/FAD-binding protein. (436 aa)    
Predicted Functional Partners:
SEQ33392.1
Thioesterase domain-containing protein.
 
     0.835
SEQ33414.1
Acyl carrier protein.
       0.804
SEQ33366.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
 
     0.654
SEP85924.1
Uncaracterized surface protein containing fasciclin (FAS1) repeats.
 
   
 0.551
SEQ33353.1
Polyketide synthase dehydratase.
 
     0.474
SEP85846.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
  
 0.460
SEP64107.1
ChrR Cupin-like domain-containing protein.
  
  
 0.435
SEP85870.1
Putative zinc-finger.
 
   
 0.418
SEQ33328.1
PfaB family protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.406
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.