STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ33595.1NhaP-type Na+/H+ or K+/H+ antiporter. (407 aa)    
Predicted Functional Partners:
SEQ70257.1
EF-hand domain pair.
   
 0.931
SEQ33580.1
Ion channel.
 
    0.893
SEP63625.1
Uncharacterized membrane protein.
 
     0.593
SEQ12929.1
cation:H+ antiporter.
 
 
 
 0.493
SER00995.1
Signal transduction histidine kinase.
 
 
 
 0.466
SEQ01987.1
Predicted Kef-type K+ transport protein, K+/H+ antiporter domain; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
 0.454
SEP88248.1
Plasma-membrane calcium-translocating P-type ATPase.
   
 
 0.438
SEQ33654.1
Voltage-gated potassium channel.
 
   
 0.415
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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