STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ39561.1Putative baseplate assembly protein. (1301 aa)    
Predicted Functional Partners:
SEQ39425.1
Hypothetical protein.
 
 
 0.997
SEQ39444.1
Hypothetical protein.
 
 
   0.997
SEQ39516.1
Hypothetical protein.
 
 
 0.997
SEQ39188.1
Hypothetical protein.
 
 
 0.993
SEQ11553.1
Hypothetical protein.
 
 
 0.982
SEQ11733.1
Hypothetical protein.
 
 
 0.980
SEQ11649.1
Conserved hypothetical phage tail region protein.
 
 
 
 0.973
SEQ11677.1
LysM domain-containing protein.
 
 
 0.968
SEQ39467.1
Hypothetical protein.
 
   
 0.961
SEQ39402.1
Hypothetical protein.
 
     0.954
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.