node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ39673.1 | rplA | SAMN05216481_107112 | SAMN05216481_109116 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.940 |
SEQ39673.1 | rplC | SAMN05216481_107112 | SAMN05216481_109142 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.934 |
SEQ39673.1 | rplE | SAMN05216481_107112 | SAMN05216481_109154 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.938 |
SEQ39673.1 | rplN | SAMN05216481_107112 | SAMN05216481_109152 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.949 |
SEQ39673.1 | rplU | SAMN05216481_107112 | SAMN05216481_101283 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.934 |
SEQ39673.1 | rpmC | SAMN05216481_107112 | SAMN05216481_109150 | Macrolide transport system ATP-binding/permease protein. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.948 |
SEQ39673.1 | rpmI | SAMN05216481_107112 | SAMN05216481_11539 | Macrolide transport system ATP-binding/permease protein. | Large subunit ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.935 |
SEQ39673.1 | rpsC | SAMN05216481_107112 | SAMN05216481_109148 | Macrolide transport system ATP-binding/permease protein. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.934 |
SEQ39673.1 | rpsE | SAMN05216481_107112 | SAMN05216481_109159 | Macrolide transport system ATP-binding/permease protein. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.938 |
SEQ39673.1 | rpsK | SAMN05216481_107112 | SAMN05216481_109168 | Macrolide transport system ATP-binding/permease protein. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.951 |
rplA | SEQ39673.1 | SAMN05216481_109116 | SAMN05216481_107112 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Macrolide transport system ATP-binding/permease protein. | 0.940 |
rplA | rplC | SAMN05216481_109116 | SAMN05216481_109142 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
rplA | rplE | SAMN05216481_109116 | SAMN05216481_109154 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.999 |
rplA | rplN | SAMN05216481_109116 | SAMN05216481_109152 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |
rplA | rplU | SAMN05216481_109116 | SAMN05216481_101283 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
rplA | rpmC | SAMN05216481_109116 | SAMN05216481_109150 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
rplA | rpmI | SAMN05216481_109116 | SAMN05216481_11539 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.998 |
rplA | rpsC | SAMN05216481_109116 | SAMN05216481_109148 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplA | rpsE | SAMN05216481_109116 | SAMN05216481_109159 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplA | rpsK | SAMN05216481_109116 | SAMN05216481_109168 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |