STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ40657.12,4-dienoyl-CoA reductase (NADPH2). (677 aa)    
Predicted Functional Partners:
SEP69698.1
Glutamate synthase (NADPH/NADH) large chain.
  
 0.999
SEQ34714.1
Electron transfer flavoprotein beta subunit.
  
 
 0.999
SEQ53415.1
IMP dehydrogenase.
  
 0.996
SEP98327.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 0.988
SEQ84609.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 0.988
SEQ34691.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.986
SEQ05271.1
Ferredoxin, 2Fe-2S.
   
 0.982
SEQ61182.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.925
SEQ50953.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.919
SEQ45109.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.910
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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