STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ45697.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
SEQ45717.1
Pyrimidine reductase, riboflavin biosynthesis.
       0.781
SEQ45739.1
Cell division protein ZapE.
 
     0.770
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.751
SEQ45649.1
Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
       0.750
SEQ63506.1
Hypothetical protein.
  
     0.616
SEQ22501.1
Hypothetical protein.
  
     0.607
SEQ58721.1
Hypothetical protein.
  
     0.605
SEQ39068.1
Osmotically inducible protein OsmC.
       0.595
SEQ68195.1
Protein of unknown function.
  
     0.581
SEQ22482.1
Hypothetical protein.
  
     0.579
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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