STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ51387.1Two-component system, OmpR family, response regulator. (245 aa)    
Predicted Functional Partners:
SER00995.1
Signal transduction histidine kinase.
  
0.998
SEQ51409.1
Two-component system, OmpR family, sensor kinase.
 
 0.992
SEQ81987.1
Signal transduction histidine kinase.
 
 0.925
SEQ01503.1
PAS domain S-box-containing protein.
  
  0.921
SEQ24860.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.906
SEQ67374.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
  
 0.897
SEQ77611.1
PAS fold.
 0.881
SEQ24210.1
Two-component system, OmpR family, sensor histidine kinase MprB.
  
 0.879
SEP55446.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 0.866
SEQ70921.1
Signal transduction histidine kinase.
  0.859
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.