STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ50094.1Cytochrome c-type biogenesis protein CcsB. (378 aa)    
Predicted Functional Partners:
SEQ50076.1
Cytochrome c biogenesis protein.
 
  
 0.996
SEQ50028.1
Thiol-disulfide isomerase or thioredoxin.
 
  
 0.993
SEQ50061.1
Cytochrome c-type biogenesis protein.
 
  
 0.985
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
 
  
 0.907
SEQ49772.1
Uroporphyrinogen III methyltransferase / synthase.
  
    0.902
SEQ37674.1
Cytochrome c biogenesis protein CcdA.
  
  
 0.890
SEQ50016.1
Broad specificity phosphatase PhoE.
  
    0.824
SEQ49979.1
Hypothetical protein.
       0.717
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.700
SEP55668.1
uroporphyrinogen-III synthase.
 
    0.661
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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