STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ50993.1Signal transduction histidine kinase. (446 aa)    
Predicted Functional Partners:
SEQ50976.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.983
SER00995.1
Signal transduction histidine kinase.
  
 0.939
SEP63296.1
Two-component system, NarL family, response regulator DesR.
 
 0.801
SEQ76801.1
Two component transcriptional regulator, LuxR family.
 
 0.801
SEQ06392.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.796
SEQ96566.1
Two component transcriptional regulator, LuxR family.
 
 0.795
SEQ92277.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.788
SEQ68111.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.787
nuoA-2
NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.
       0.782
nuoB-2
NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
       0.782
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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