Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP58097.1 | SEP60999.1 | SAMN05216481_101234 | SAMN05216481_101393 | Endo-1,4-beta-xylanase. | Arabinan endo-1,5-alpha-L-arabinosidase. | 0.703 |
SEP58097.1 | SEQ67208.1 | SAMN05216481_101234 | SAMN05216481_112105 | Endo-1,4-beta-xylanase. | Carbohydrate binding domain-containing protein. | 0.540 |
SEP58097.1 | SEQ82573.1 | SAMN05216481_101234 | SAMN05216481_11697 | Endo-1,4-beta-xylanase. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.882 |
SEP60309.1 | SEP60999.1 | SAMN05216481_101357 | SAMN05216481_101393 | Endo-1,4-beta-xylanase. | Arabinan endo-1,5-alpha-L-arabinosidase. | 0.841 |
SEP60309.1 | SEQ12684.1 | SAMN05216481_101357 | SAMN05216481_10493 | Endo-1,4-beta-xylanase. | Carbohydrate binding module (family 6). | 0.513 |
SEP60309.1 | SEQ67208.1 | SAMN05216481_101357 | SAMN05216481_112105 | Endo-1,4-beta-xylanase. | Carbohydrate binding domain-containing protein. | 0.766 |
SEP60309.1 | SEQ82573.1 | SAMN05216481_101357 | SAMN05216481_11697 | Endo-1,4-beta-xylanase. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.851 |
SEP60999.1 | SEP58097.1 | SAMN05216481_101393 | SAMN05216481_101234 | Arabinan endo-1,5-alpha-L-arabinosidase. | Endo-1,4-beta-xylanase. | 0.703 |
SEP60999.1 | SEP60309.1 | SAMN05216481_101393 | SAMN05216481_101357 | Arabinan endo-1,5-alpha-L-arabinosidase. | Endo-1,4-beta-xylanase. | 0.841 |
SEP60999.1 | SEP85148.1 | SAMN05216481_101393 | SAMN05216481_102240 | Arabinan endo-1,5-alpha-L-arabinosidase. | Hypothetical protein. | 0.420 |
SEP60999.1 | SEQ12684.1 | SAMN05216481_101393 | SAMN05216481_10493 | Arabinan endo-1,5-alpha-L-arabinosidase. | Carbohydrate binding module (family 6). | 0.503 |
SEP60999.1 | SEQ37818.1 | SAMN05216481_101393 | SAMN05216481_10734 | Arabinan endo-1,5-alpha-L-arabinosidase. | Endo-1,4-beta-xylanase. | 0.672 |
SEP60999.1 | SEQ67208.1 | SAMN05216481_101393 | SAMN05216481_112105 | Arabinan endo-1,5-alpha-L-arabinosidase. | Carbohydrate binding domain-containing protein. | 0.688 |
SEP60999.1 | SEQ82573.1 | SAMN05216481_101393 | SAMN05216481_11697 | Arabinan endo-1,5-alpha-L-arabinosidase. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.521 |
SEP60999.1 | SEQ90943.1 | SAMN05216481_101393 | SAMN05216481_11986 | Arabinan endo-1,5-alpha-L-arabinosidase. | Endo-1,4-beta-xylanase. | 0.841 |
SEP85148.1 | SEP60999.1 | SAMN05216481_102240 | SAMN05216481_101393 | Hypothetical protein. | Arabinan endo-1,5-alpha-L-arabinosidase. | 0.420 |
SEP85148.1 | SEQ67208.1 | SAMN05216481_102240 | SAMN05216481_112105 | Hypothetical protein. | Carbohydrate binding domain-containing protein. | 0.516 |
SEP85148.1 | SEQ82573.1 | SAMN05216481_102240 | SAMN05216481_11697 | Hypothetical protein. | Ricin-type beta-trefoil lectin domain-containing protein. | 0.614 |
SEP85829.1 | SEQ67208.1 | SAMN05216481_102272 | SAMN05216481_112105 | Aldo/keto reductase. | Carbohydrate binding domain-containing protein. | 0.634 |
SEP90558.1 | SEQ67208.1 | SAMN05216481_102499 | SAMN05216481_112105 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Carbohydrate binding domain-containing protein. | 0.707 |
page 1 of 3