Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP60903.1 | SEQ23257.1 | SAMN05216481_101388 | SAMN05216481_10543 | Hypothetical protein. | Thiamine kinase. | 0.758 |
SEP60903.1 | SEQ66819.1 | SAMN05216481_101388 | SAMN05216481_11284 | Hypothetical protein. | Hypothetical protein. | 0.553 |
SEQ23257.1 | SEP60903.1 | SAMN05216481_10543 | SAMN05216481_101388 | Thiamine kinase. | Hypothetical protein. | 0.758 |
SEQ23257.1 | SEQ66819.1 | SAMN05216481_10543 | SAMN05216481_11284 | Thiamine kinase. | Hypothetical protein. | 0.518 |
SEQ49632.1 | SEQ66819.1 | SAMN05216481_1098 | SAMN05216481_11284 | Hypothetical protein. | Hypothetical protein. | 0.561 |
SEQ49632.1 | SEQ66840.1 | SAMN05216481_1098 | SAMN05216481_11285 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.503 |
SEQ66783.1 | SEQ66803.1 | SAMN05216481_11282 | SAMN05216481_11283 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.987 |
SEQ66783.1 | SEQ66819.1 | SAMN05216481_11282 | SAMN05216481_11284 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.610 |
SEQ66783.1 | SEQ66840.1 | SAMN05216481_11282 | SAMN05216481_11285 | ABC-2 type transport system permease protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.610 |
SEQ66803.1 | SEQ66783.1 | SAMN05216481_11283 | SAMN05216481_11282 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.987 |
SEQ66803.1 | SEQ66819.1 | SAMN05216481_11283 | SAMN05216481_11284 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.610 |
SEQ66803.1 | SEQ66840.1 | SAMN05216481_11283 | SAMN05216481_11285 | ABC-2 type transport system ATP-binding protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.610 |
SEQ66819.1 | SEP60903.1 | SAMN05216481_11284 | SAMN05216481_101388 | Hypothetical protein. | Hypothetical protein. | 0.553 |
SEQ66819.1 | SEQ23257.1 | SAMN05216481_11284 | SAMN05216481_10543 | Hypothetical protein. | Thiamine kinase. | 0.518 |
SEQ66819.1 | SEQ49632.1 | SAMN05216481_11284 | SAMN05216481_1098 | Hypothetical protein. | Hypothetical protein. | 0.561 |
SEQ66819.1 | SEQ66783.1 | SAMN05216481_11284 | SAMN05216481_11282 | Hypothetical protein. | ABC-2 type transport system permease protein. | 0.610 |
SEQ66819.1 | SEQ66803.1 | SAMN05216481_11284 | SAMN05216481_11283 | Hypothetical protein. | ABC-2 type transport system ATP-binding protein. | 0.610 |
SEQ66819.1 | SEQ66840.1 | SAMN05216481_11284 | SAMN05216481_11285 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.801 |
SEQ66819.1 | SEQ66852.1 | SAMN05216481_11284 | SAMN05216481_11286 | Hypothetical protein. | Repeat domain-containing protein. | 0.517 |
SEQ66819.1 | rpoB | SAMN05216481_11284 | SAMN05216481_109119 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.562 |
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