Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ46248.1 | SEQ66819.1 | SAMN05216481_108146 | SAMN05216481_11284 | Protein of unknown function. | Hypothetical protein. | 0.514 |
SEQ46248.1 | SEQ66840.1 | SAMN05216481_108146 | SAMN05216481_11285 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.514 |
SEQ62235.1 | SEQ66819.1 | SAMN05216481_11188 | SAMN05216481_11284 | Putative zinc-finger. | Hypothetical protein. | 0.514 |
SEQ62235.1 | SEQ66840.1 | SAMN05216481_11188 | SAMN05216481_11285 | Putative zinc-finger. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.514 |
SEQ63489.1 | SEQ66819.1 | SAMN05216481_111159 | SAMN05216481_11284 | Mycothiol system anti-sigma-R factor. | Hypothetical protein. | 0.514 |
SEQ63489.1 | SEQ66840.1 | SAMN05216481_111159 | SAMN05216481_11285 | Mycothiol system anti-sigma-R factor. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.557 |
SEQ66783.1 | SEQ66803.1 | SAMN05216481_11282 | SAMN05216481_11283 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.987 |
SEQ66783.1 | SEQ66819.1 | SAMN05216481_11282 | SAMN05216481_11284 | ABC-2 type transport system permease protein. | Hypothetical protein. | 0.610 |
SEQ66783.1 | SEQ66840.1 | SAMN05216481_11282 | SAMN05216481_11285 | ABC-2 type transport system permease protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.610 |
SEQ66803.1 | SEQ66783.1 | SAMN05216481_11283 | SAMN05216481_11282 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.987 |
SEQ66803.1 | SEQ66819.1 | SAMN05216481_11283 | SAMN05216481_11284 | ABC-2 type transport system ATP-binding protein. | Hypothetical protein. | 0.610 |
SEQ66803.1 | SEQ66840.1 | SAMN05216481_11283 | SAMN05216481_11285 | ABC-2 type transport system ATP-binding protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.610 |
SEQ66819.1 | SEQ46248.1 | SAMN05216481_11284 | SAMN05216481_108146 | Hypothetical protein. | Protein of unknown function. | 0.514 |
SEQ66819.1 | SEQ62235.1 | SAMN05216481_11284 | SAMN05216481_11188 | Hypothetical protein. | Putative zinc-finger. | 0.514 |
SEQ66819.1 | SEQ63489.1 | SAMN05216481_11284 | SAMN05216481_111159 | Hypothetical protein. | Mycothiol system anti-sigma-R factor. | 0.514 |
SEQ66819.1 | SEQ66783.1 | SAMN05216481_11284 | SAMN05216481_11282 | Hypothetical protein. | ABC-2 type transport system permease protein. | 0.610 |
SEQ66819.1 | SEQ66803.1 | SAMN05216481_11284 | SAMN05216481_11283 | Hypothetical protein. | ABC-2 type transport system ATP-binding protein. | 0.610 |
SEQ66819.1 | SEQ66840.1 | SAMN05216481_11284 | SAMN05216481_11285 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.801 |
SEQ66819.1 | rpoA | SAMN05216481_11284 | SAMN05216481_109170 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.516 |
SEQ66819.1 | rpoB | SAMN05216481_11284 | SAMN05216481_109119 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.562 |
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