STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ69836.1Thioesterase-like superfamily protein. (277 aa)    
Predicted Functional Partners:
SEQ69858.1
Uncharacterized membrane protein YeiH.
       0.820
SEQ06904.1
Sugar phosphate isomerase/epimerase.
  
    0.785
SEQ69876.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.747
SEQ69797.1
Cysteine desulfurase.
       0.704
SEQ61773.1
Peptide/nickel transport system permease protein.
       0.595
SEQ69970.1
SseB protein C-terminal domain-containing protein.
       0.578
SEP97746.1
TIGR03083 family protein.
  
     0.530
SEQ69953.1
Peptide/nickel transport system substrate-binding protein.
       0.515
SEQ69902.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.487
SEQ69918.1
Peptide/nickel transport system permease protein.
       0.487
Your Current Organism:
Streptomyces radiopugnans
NCBI taxonomy Id: 403935
Other names: CGMCC 4.3519, DSM 41901, JCM 15480, S. radiopugnans, Streptomyces radiopugnans Mao et al. 2007, strain R97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.